Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 MSTO2P-201ENST00000314835 1709 ntBASIC17.06■□□□□ 0.32
YME1L1Q96TA2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
YME1L1Q96TA2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 C2orf27AP3-201ENST00000434123 579 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 AC093433.1-201ENST00000458048 571 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 RN7SL560P-201ENST00000577943 264 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 MIR3615-201ENST00000581999 87 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 AC244669.2-201ENST00000612320 853 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 AL354718.3-201ENST00000616414 581 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 CR382287.1-201ENST00000623954 586 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 AC105020.1-201ENST00000435356 2205 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 HLA-A-202ENST00000376806 1854 ntBASIC17.05■□□□□ 0.32
YME1L1Q96TA2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
YME1L1Q96TA2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AC026954.1-201ENST00000429771 1293 ntBASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 RPL13AP20-201ENST00000459725 609 ntBASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 KRT90P-201ENST00000549264 1064 ntBASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AC091271.1-201ENST00000611877 1162 ntBASIC17.04■□□□□ 0.32
YME1L1Q96TA2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 AC005252.2-201ENST00000624630 1141 ntBASIC17.04■□□□□ 0.32
YME1L1Q96TA2 RHOXF1P1-202ENST00000635473 501 ntBASIC17.04■□□□□ 0.32
YME1L1Q96TA2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
YME1L1Q96TA2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms