Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC38A9Q8NBW4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC38A9Q8NBW4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC38A9Q8NBW4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC38A9Q8NBW4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC38A9Q8NBW4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC38A9Q8NBW4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15□□□□□ -0.01
SLC38A9Q8NBW4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AC079776.1-201ENST00000401540 1152 ntBASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 TMEM14DP-201ENST00000422205 345 ntBASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 HNRNPUP1-201ENST00000554987 333 ntBASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AL450472.2-201ENST00000603663 1156 ntBASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AL162274.1-201ENST00000617191 1098 ntBASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 FER1L4-210ENST00000615531 5998 ntBASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SLC38A9Q8NBW4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.98□□□□□ -0.01
SLC38A9Q8NBW4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms