Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 AC134407.2-201ENST00000625089 1978 ntBASIC14.28□□□□□ -0.12
CSNK1A1P48729 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CSNK1A1P48729 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CSNK1A1P48729 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 AC007950.2-201ENST00000615045 2347 ntBASIC14.27□□□□□ -0.12
CSNK1A1P48729 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
CSNK1A1P48729 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CSNK1A1P48729 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 AC011477.6-201ENST00000604980 1927 ntBASIC14.27□□□□□ -0.12
CSNK1A1P48729 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CSNK1A1P48729 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.27□□□□□ -0.12
CSNK1A1P48729 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.27□□□□□ -0.12
CSNK1A1P48729 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
CSNK1A1P48729 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.27□□□□□ -0.12
CSNK1A1P48729 AL691432.1-201ENST00000596308 1422 ntBASIC14.27□□□□□ -0.12
CSNK1A1P48729 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.27□□□□□ -0.12
CSNK1A1P48729 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CSNK1A1P48729 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 RPS8P6-201ENST00000426177 609 ntBASIC14.27□□□□□ -0.13
CSNK1A1P48729 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 AC018529.1-201ENST00000613063 361 ntBASIC14.27□□□□□ -0.13
CSNK1A1P48729 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 AP003680.1-201ENST00000598970 3660 ntBASIC14.27□□□□□ -0.13
CSNK1A1P48729 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.27□□□□□ -0.13
CSNK1A1P48729 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CSNK1A1P48729 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 PRAL-201ENST00000624952 3286 ntBASIC14.26□□□□□ -0.13
CSNK1A1P48729 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 DNAJB3-202ENST00000449667 1266 ntBASIC14.26□□□□□ -0.13
CSNK1A1P48729 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 AC026150.2-201ENST00000564693 1156 ntBASIC14.26□□□□□ -0.13
CSNK1A1P48729 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 AC003101.2-201ENST00000612557 442 ntBASIC14.26□□□□□ -0.13
CSNK1A1P48729 AL691403.2-201ENST00000618460 490 ntBASIC14.26□□□□□ -0.13
CSNK1A1P48729 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.26□□□□□ -0.13
CSNK1A1P48729 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CSNK1A1P48729 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms