Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HOXA10P31260 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 AC244452.3-201ENST00000636814 210 ntBASIC19.23■□□□□ 0.67
HOXA10P31260 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.23■□□□□ 0.67
HOXA10P31260 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA10P31260 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA10P31260 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA10P31260 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HOXA10P31260 GRN-222ENST00000639447 1314 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXA10P31260 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXA10P31260 FLJ38576-201ENST00000623820 2459 ntBASIC19.23■□□□□ 0.67
HOXA10P31260 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
HOXA10P31260 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HOXA10P31260 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA10P31260 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
HOXA10P31260 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
HOXA10P31260 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
HOXA10P31260 MTX1P1-201ENST00000440904 838 ntBASIC19.22■□□□□ 0.67
HOXA10P31260 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
HOXA10P31260 AC114812.1-204ENST00000449669 728 ntBASIC19.22■□□□□ 0.67
HOXA10P31260 BX284668.4-201ENST00000453917 508 ntBASIC19.22■□□□□ 0.67
HOXA10P31260 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.22■□□□□ 0.67
HOXA10P31260 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA10P31260 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA10P31260 RN7SL48P-201ENST00000579283 293 ntBASIC19.22■□□□□ 0.67
HOXA10P31260 PRSS30P-206ENST00000641773 873 ntBASIC19.22■□□□□ 0.67
HOXA10P31260 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXA10P31260 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA10P31260 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXA10P31260 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXA10P31260 AC138028.6-201ENST00000616106 1482 ntBASIC19.22■□□□□ 0.67
HOXA10P31260 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA10P31260 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA10P31260 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 AC092506.1-202ENST00000401022 528 ntBASIC19.21■□□□□ 0.67
HOXA10P31260 SLC25A24P2-201ENST00000415059 510 ntBASIC19.21■□□□□ 0.67
HOXA10P31260 KLF2P2-201ENST00000416807 1039 ntBASIC19.21■□□□□ 0.67
HOXA10P31260 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXA10P31260 AC091804.1-201ENST00000486888 567 ntBASIC19.21■□□□□ 0.67
HOXA10P31260 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.21■□□□□ 0.67
HOXA10P31260 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 AC104982.3-201ENST00000581995 514 ntBASIC19.21■□□□□ 0.67
HOXA10P31260 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXA10P31260 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA10P31260 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXA10P31260 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA10P31260 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA10P31260 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA10P31260 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA10P31260 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXA10P31260 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXA10P31260 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.66
HOXA10P31260 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
HOXA10P31260 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXA10P31260 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HOXA10P31260 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXA10P31260 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HOXA10P31260 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HOXA10P31260 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXA10P31260 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms