Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Gm4875-201ENSMUST00000118257 786 ntBASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Gm24420-201ENSMUST00000176676 59 ntBASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Gm27321-201ENSMUST00000185021 205 ntBASIC11.49□□□□□ -0.57
Gm11127A7VMS2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm11127A7VMS2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm6912-201ENSMUST00000117218 544 ntBASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm9063-201ENSMUST00000223299 582 ntBASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm11127A7VMS2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm11127A7VMS2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm11127A7VMS2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm11127A7VMS2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm11127A7VMS2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm11127A7VMS2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm11127A7VMS2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm11127A7VMS2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm11127A7VMS2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms