Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 TDH-203ENST00000531764 1110 ntBASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DNMT3BQ9UBC3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 PHKG1P2-201ENST00000457537 863 ntBASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 PDIA3P1-201ENST00000471856 1510 ntBASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DNMT3BQ9UBC3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.58■□□□□ 0.25
DNMT3BQ9UBC3 AC134407.2-201ENST00000625089 1978 ntBASIC16.58■□□□□ 0.25
DNMT3BQ9UBC3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
DNMT3BQ9UBC3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
DNMT3BQ9UBC3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DNMT3BQ9UBC3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
DNMT3BQ9UBC3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DNMT3BQ9UBC3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 AC093525.8-201ENST00000624099 1342 ntBASIC16.58■□□□□ 0.24
DNMT3BQ9UBC3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms