Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.85□□□□□ -0.19
HCFC1P51610 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
HCFC1P51610 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.85□□□□□ -0.19
HCFC1P51610 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 AC004987.2-201ENST00000395959 1148 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 ACTG1P3-201ENST00000431775 1114 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 FO681548.1-201ENST00000455617 1132 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.85□□□□□ -0.19
HCFC1P51610 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.85□□□□□ -0.19
HCFC1P51610 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.85□□□□□ -0.19
HCFC1P51610 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HCFC1P51610 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
HCFC1P51610 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.85□□□□□ -0.19
HCFC1P51610 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
HCFC1P51610 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HCFC1P51610 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 BCRP2-202ENST00000447763 634 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.85□□□□□ -0.19
HCFC1P51610 RPL13AP25-201ENST00000484130 612 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 BCRP6-201ENST00000510112 632 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 BCRP7-201ENST00000511549 544 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HCFC1P51610 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.85□□□□□ -0.19
HCFC1P51610 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 AL359711.2-201ENST00000563105 872 ntBASIC13.85□□□□□ -0.19
HCFC1P51610 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.85□□□□□ -0.19
HCFC1P51610 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCFC1P51610 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.84□□□□□ -0.19
HCFC1P51610 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.84□□□□□ -0.19
HCFC1P51610 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.84□□□□□ -0.19
HCFC1P51610 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HCFC1P51610 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
HCFC1P51610 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.84□□□□□ -0.19
HCFC1P51610 AC092933.1-201ENST00000393644 945 ntBASIC13.84□□□□□ -0.19
HCFC1P51610 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.84□□□□□ -0.19
HCFC1P51610 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.84□□□□□ -0.19
HCFC1P51610 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.84□□□□□ -0.19
HCFC1P51610 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.84□□□□□ -0.19
HCFC1P51610 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.84□□□□□ -0.19
HCFC1P51610 AC244093.1-201ENST00000610837 814 ntBASIC13.84□□□□□ -0.19
HCFC1P51610 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 AL139099.5-201ENST00000635274 300 ntBASIC13.84□□□□□ -0.19
HCFC1P51610 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HCFC1P51610 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.84□□□□□ -0.19
HCFC1P51610 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCFC1P51610 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
HCFC1P51610 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.84□□□□□ -0.19
HCFC1P51610 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.84□□□□□ -0.19
HCFC1P51610 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms