Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
NFKB1P19838 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.3■□□□□ 0.2
NFKB1P19838 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.3■□□□□ 0.2
NFKB1P19838 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NFKB1P19838 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 CICP13-201ENST00000422015 2789 ntBASIC16.3■□□□□ 0.2
NFKB1P19838 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.3■□□□□ 0.2
NFKB1P19838 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.3■□□□□ 0.2
NFKB1P19838 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NFKB1P19838 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.3■□□□□ 0.2
NFKB1P19838 CNN2P11-201ENST00000429351 262 ntBASIC16.3■□□□□ 0.2
NFKB1P19838 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 AC004967.1-201ENST00000453589 447 ntBASIC16.3■□□□□ 0.2
NFKB1P19838 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.3■□□□□ 0.2
NFKB1P19838 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.3■□□□□ 0.2
NFKB1P19838 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.3■□□□□ 0.2
NFKB1P19838 BANF1P1-201ENST00000553684 263 ntBASIC16.3■□□□□ 0.2
NFKB1P19838 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 AC026150.2-201ENST00000564693 1156 ntBASIC16.3■□□□□ 0.2
NFKB1P19838 AC026979.3-201ENST00000607315 403 ntBASIC16.3■□□□□ 0.2
NFKB1P19838 AC018529.1-201ENST00000613063 361 ntBASIC16.3■□□□□ 0.2
NFKB1P19838 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.3■□□□□ 0.2
NFKB1P19838 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NFKB1P19838 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.3■□□□□ 0.2
NFKB1P19838 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NFKB1P19838 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NFKB1P19838 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NFKB1P19838 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 HYMAI-201ENST00000635591 3347 ntBASIC16.29■□□□□ 0.2
NFKB1P19838 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.29■□□□□ 0.2
NFKB1P19838 AL353705.2-201ENST00000428243 662 ntBASIC16.29■□□□□ 0.2
NFKB1P19838 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.29■□□□□ 0.2
NFKB1P19838 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.29■□□□□ 0.2
NFKB1P19838 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.29■□□□□ 0.2
NFKB1P19838 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NFKB1P19838 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NFKB1P19838 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.29■□□□□ 0.2
NFKB1P19838 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.29■□□□□ 0.2
NFKB1P19838 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NFKB1P19838 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.29■□□□□ 0.2
NFKB1P19838 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NFKB1P19838 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.29■□□□□ 0.2
NFKB1P19838 AC027612.4-201ENST00000605371 583 ntBASIC16.29■□□□□ 0.2
NFKB1P19838 AL596442.2-201ENST00000610240 980 ntBASIC16.29■□□□□ 0.2
NFKB1P19838 AC003101.2-201ENST00000612557 442 ntBASIC16.29■□□□□ 0.2
NFKB1P19838 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NFKB1P19838 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
NFKB1P19838 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NFKB1P19838 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NFKB1P19838 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.29■□□□□ 0.2
NFKB1P19838 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NFKB1P19838 AL139384.1-201ENST00000612143 3047 ntBASIC16.29■□□□□ 0.2
NFKB1P19838 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.29■□□□□ 0.2
NFKB1P19838 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NFKB1P19838 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NFKB1P19838 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.28■□□□□ 0.2
NFKB1P19838 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
NFKB1P19838 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.28■□□□□ 0.2
NFKB1P19838 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.28■□□□□ 0.2
NFKB1P19838 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NFKB1P19838 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NFKB1P19838 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NFKB1P19838 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.28■□□□□ 0.2
NFKB1P19838 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.28■□□□□ 0.2
NFKB1P19838 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.28■□□□□ 0.2
NFKB1P19838 AC105021.1-202ENST00000570572 669 ntBASIC16.28■□□□□ 0.2
NFKB1P19838 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.28■□□□□ 0.2
NFKB1P19838 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms