Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 UPF3AP2-201ENST00000457924 1132 ntBASIC20.04■□□□□ 0.8
ITGB4P16144 MIR3619-201ENST00000579667 83 ntBASIC20.04■□□□□ 0.8
ITGB4P16144 RN7SL190P-201ENST00000582519 257 ntBASIC20.04■□□□□ 0.8
ITGB4P16144 AC016629.1-201ENST00000596579 586 ntBASIC20.04■□□□□ 0.8
ITGB4P16144 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC20.04■□□□□ 0.8
ITGB4P16144 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB4P16144 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ITGB4P16144 KRT8P14-201ENST00000414254 1442 ntBASIC20.03■□□□□ 0.8
ITGB4P16144 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.03■□□□□ 0.8
ITGB4P16144 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ITGB4P16144 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.03■□□□□ 0.8
ITGB4P16144 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ITGB4P16144 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.03■□□□□ 0.8
ITGB4P16144 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.03■□□□□ 0.8
ITGB4P16144 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.03■□□□□ 0.8
ITGB4P16144 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.03■□□□□ 0.8
ITGB4P16144 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.03■□□□□ 0.8
ITGB4P16144 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.03■□□□□ 0.8
ITGB4P16144 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ITGB4P16144 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.03■□□□□ 0.8
ITGB4P16144 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.03■□□□□ 0.8
ITGB4P16144 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC20.03■□□□□ 0.8
ITGB4P16144 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.03■□□□□ 0.8
ITGB4P16144 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.03■□□□□ 0.8
ITGB4P16144 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 AC124067.4-201ENST00000519691 2379 ntBASIC20.03■□□□□ 0.8
ITGB4P16144 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ITGB4P16144 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ITGB4P16144 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.02■□□□□ 0.8
ITGB4P16144 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 HINT2P1-201ENST00000419438 481 ntBASIC20.02■□□□□ 0.8
ITGB4P16144 GHSR-202ENST00000427970 912 ntBASIC20.02■□□□□ 0.8
ITGB4P16144 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.02■□□□□ 0.8
ITGB4P16144 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.02■□□□□ 0.8
ITGB4P16144 BX284668.4-201ENST00000453917 508 ntBASIC20.02■□□□□ 0.8
ITGB4P16144 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.02■□□□□ 0.8
ITGB4P16144 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.02■□□□□ 0.8
ITGB4P16144 PPY2P-201ENST00000582808 702 ntBASIC20.02■□□□□ 0.8
ITGB4P16144 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 AC138649.2-201ENST00000615886 705 ntBASIC20.02■□□□□ 0.8
ITGB4P16144 AC138627.1-207ENST00000641560 1006 ntBASIC20.02■□□□□ 0.8
ITGB4P16144 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ITGB4P16144 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ITGB4P16144 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ITGB4P16144 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ITGB4P16144 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
ITGB4P16144 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.02■□□□□ 0.79
ITGB4P16144 POM121L10P-201ENST00000436994 1285 ntBASIC20.02■□□□□ 0.79
ITGB4P16144 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.02■□□□□ 0.79
ITGB4P16144 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.02■□□□□ 0.79
ITGB4P16144 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.02■□□□□ 0.79
ITGB4P16144 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC20.02■□□□□ 0.79
ITGB4P16144 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.02■□□□□ 0.79
ITGB4P16144 AL645728.2-202ENST00000641679 227 ntBASIC20.02■□□□□ 0.79
ITGB4P16144 PRSS30P-206ENST00000641773 873 ntBASIC20.02■□□□□ 0.79
ITGB4P16144 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC20.02■□□□□ 0.79
ITGB4P16144 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ITGB4P16144 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITGB4P16144 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.01■□□□□ 0.79
ITGB4P16144 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITGB4P16144 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITGB4P16144 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.01■□□□□ 0.79
ITGB4P16144 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ITGB4P16144 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ITGB4P16144 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ITGB4P16144 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.01■□□□□ 0.79
ITGB4P16144 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
ITGB4P16144 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.01■□□□□ 0.79
ITGB4P16144 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms