Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC9.74□□□□□ -0.85
APOBP04114 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC9.74□□□□□ -0.85
APOBP04114 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC9.74□□□□□ -0.85
APOBP04114 AC012618.1-201ENST00000461223 412 ntBASIC9.74□□□□□ -0.85
APOBP04114 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
APOBP04114 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
APOBP04114 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
APOBP04114 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC9.74□□□□□ -0.85
APOBP04114 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 AC125604.1-201ENST00000496255 707 ntBASIC9.73□□□□□ -0.85
APOBP04114 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC9.73□□□□□ -0.85
APOBP04114 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC9.73□□□□□ -0.85
APOBP04114 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC9.73□□□□□ -0.85
APOBP04114 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
APOBP04114 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
APOBP04114 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 AP001282.1-201ENST00000531301 1499 ntBASIC9.73□□□□□ -0.85
APOBP04114 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC9.73□□□□□ -0.85
APOBP04114 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
APOBP04114 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC9.73□□□□□ -0.85
APOBP04114 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 NOC2LP2-201ENST00000407594 1944 ntBASIC9.73□□□□□ -0.85
APOBP04114 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 AC092171.3-201ENST00000610122 2651 ntBASIC9.73□□□□□ -0.85
APOBP04114 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC9.73□□□□□ -0.85
APOBP04114 KRT18P25-201ENST00000508931 1278 ntBASIC9.73□□□□□ -0.85
APOBP04114 NEU3-205ENST00000531619 582 ntTSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC9.73□□□□□ -0.85
APOBP04114 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
APOBP04114 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC9.73□□□□□ -0.85
APOBP04114 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 AC005915.1-201ENST00000624912 2018 ntBASIC9.73□□□□□ -0.85
APOBP04114 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 CHMP1AP1-201ENST00000445563 662 ntBASIC9.73□□□□□ -0.85
APOBP04114 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC9.73□□□□□ -0.85
APOBP04114 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC9.73□□□□□ -0.85
APOBP04114 NAT9-222ENST00000583476 583 ntTSL 3 BASIC9.73□□□□□ -0.85
APOBP04114 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC9.73□□□□□ -0.85
APOBP04114 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC9.73□□□□□ -0.85
APOBP04114 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
APOBP04114 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC9.73□□□□□ -0.85
APOBP04114 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC9.73□□□□□ -0.85
APOBP04114 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 CAP2P1-201ENST00000557743 1390 ntBASIC9.72□□□□□ -0.85
APOBP04114 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC9.72□□□□□ -0.85
APOBP04114 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 AP001094.4-201ENST00000579008 2176 ntBASIC9.72□□□□□ -0.85
APOBP04114 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
APOBP04114 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 AC026410.1-201ENST00000507366 1101 ntBASIC9.72□□□□□ -0.85
APOBP04114 AL353770.1-201ENST00000614915 403 ntBASIC9.72□□□□□ -0.85
APOBP04114 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
APOBP04114 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC9.72□□□□□ -0.85
APOBP04114 LRRFIP1P1-201ENST00000498774 2246 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms