Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAI2Q9Y5P3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 CETN4P-206ENST00000642099 2168 ntBASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 AC069120.2-201ENST00000524091 540 ntBASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 AL079307.3-201ENST00000556114 283 ntBASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 AC112504.1-201ENST00000623415 1841 ntBASIC16.22■□□□□ 0.19
RAI2Q9Y5P3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 FAM207CP-201ENST00000443486 507 ntBASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 SPDYE12P-201ENST00000618416 771 ntBASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 FO538757.1-201ENST00000623083 1397 ntBASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.21■□□□□ 0.19
RAI2Q9Y5P3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RAI2Q9Y5P3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.21■□□□□ 0.18
RAI2Q9Y5P3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 SPDYE17-201ENST00000412399 783 ntBASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 TREML5P-201ENST00000421694 576 ntBASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.2■□□□□ 0.18
RAI2Q9Y5P3 AL138828.2-201ENST00000615812 383 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms