Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AC142381.1-201ENST00000426099 345 ntBASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AC112482.1-201ENST00000492080 688 ntBASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AC105233.2-201ENST00000523697 349 ntBASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AF228730.5-201ENST00000530288 346 ntBASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AC061975.2-201ENST00000581722 295 ntBASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AKAP8P1-201ENST00000434743 1349 ntBASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPF3BQ9BZI7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 AC098859.1-201ENST00000502915 1238 ntBASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 AC243562.1-201ENST00000560672 389 ntBASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 AC040169.1-201ENST00000565382 521 ntBASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 SPTSSB-204ENST00000617024 1292 ntBASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UPF3BQ9BZI7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UPF3BQ9BZI7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.14■□□□□ 0.66
UPF3BQ9BZI7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
UPF3BQ9BZI7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.14■□□□□ 0.66
UPF3BQ9BZI7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
UPF3BQ9BZI7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AC244107.1-201ENST00000442033 332 ntBASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 KRT8P48-201ENST00000515599 1220 ntBASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.14■□□□□ 0.65
UPF3BQ9BZI7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms