Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 HIST3H2BA-201ENST00000436555 524 ntBASIC17.26■□□□□ 0.35
LRCH3Q96II8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 AL139010.1-201ENST00000454878 894 ntBASIC17.26■□□□□ 0.35
LRCH3Q96II8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 AL133499.1-201ENST00000596207 608 ntBASIC17.26■□□□□ 0.35
LRCH3Q96II8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.26■□□□□ 0.35
LRCH3Q96II8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LRCH3Q96II8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.25■□□□□ 0.35
LRCH3Q96II8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
LRCH3Q96II8 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LRCH3Q96II8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 MIR769-201ENST00000390225 118 ntBASIC17.24■□□□□ 0.35
LRCH3Q96II8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 SPTLC1P5-201ENST00000450718 252 ntBASIC17.24■□□□□ 0.35
LRCH3Q96II8 HOMER2P2-201ENST00000451621 847 ntBASIC17.24■□□□□ 0.35
LRCH3Q96II8 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LRCH3Q96II8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms