Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AC241585.1-201ENST00000433527 519 ntBASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 SERBP1P3-201ENST00000459980 809 ntBASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AC010336.2-201ENST00000564226 506 ntBASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 MIR6069-201ENST00000620069 79 ntBASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 PRAL-201ENST00000624952 3286 ntBASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.14□□□□□ -0.15
ZIC4Q8N9L1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 AC136604.1-201ENST00000418535 575 ntBASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 IGHV3-42-201ENST00000520410 361 ntBASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 AL390754.1-201ENST00000619088 582 ntBASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZIC4Q8N9L1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
ZIC4Q8N9L1 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms