Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 U62317.3-201ENST00000608319 855 ntBASIC18.52■□□□□ 0.56
CDCA5Q96FF9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
CDCA5Q96FF9 AP001282.1-201ENST00000531301 1499 ntBASIC18.52■□□□□ 0.55
CDCA5Q96FF9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 AC091046.1-201ENST00000331871 207 ntBASIC18.51■□□□□ 0.55
CDCA5Q96FF9 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 RN7SL769P-201ENST00000469386 295 ntBASIC18.51■□□□□ 0.55
CDCA5Q96FF9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 AC018470.1-201ENST00000624790 3129 ntBASIC18.51■□□□□ 0.55
CDCA5Q96FF9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDCA5Q96FF9 NOC2LP2-201ENST00000407594 1944 ntBASIC18.51■□□□□ 0.55
CDCA5Q96FF9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 NDUFV2P1-201ENST00000596415 907 ntBASIC18.5■□□□□ 0.55
CDCA5Q96FF9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 AC005915.1-201ENST00000624912 2018 ntBASIC18.5■□□□□ 0.55
CDCA5Q96FF9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.5■□□□□ 0.55
CDCA5Q96FF9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms