Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VARS2Q5ST30 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VARS2Q5ST30 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VARS2Q5ST30 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VARS2Q5ST30 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VARS2Q5ST30 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
VARS2Q5ST30 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
VARS2Q5ST30 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VARS2Q5ST30 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.96■□□□□ 0.3
VARS2Q5ST30 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VARS2Q5ST30 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.96■□□□□ 0.3
VARS2Q5ST30 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.96■□□□□ 0.3
VARS2Q5ST30 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.96■□□□□ 0.3
VARS2Q5ST30 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 NKILA-202ENST00000614771 2598 ntBASIC16.95■□□□□ 0.3
VARS2Q5ST30 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.95■□□□□ 0.3
VARS2Q5ST30 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VARS2Q5ST30 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AC017083.2-201ENST00000608069 979 ntBASIC16.94■□□□□ 0.3
VARS2Q5ST30 MIR8072-201ENST00000614241 80 ntBASIC16.94■□□□□ 0.3
VARS2Q5ST30 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.94■□□□□ 0.3
VARS2Q5ST30 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 AC079328.2-201ENST00000561241 3354 ntBASIC16.94■□□□□ 0.3
VARS2Q5ST30 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VARS2Q5ST30 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 REXO1L1P-202ENST00000608646 1974 ntBASIC16.93■□□□□ 0.3
VARS2Q5ST30 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VARS2Q5ST30 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.93■□□□□ 0.3
VARS2Q5ST30 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms