Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Gm15236-201ENSMUST00000117309 379 ntBASIC14.08□□□□□ -0.16
Col9a2Q07643 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.08□□□□□ -0.16
Col9a2Q07643 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.08□□□□□ -0.16
Col9a2Q07643 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col9a2Q07643 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col9a2Q07643 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.08□□□□□ -0.16
Col9a2Q07643 Gm19931-201ENSMUST00000198920 368 ntBASIC14.08□□□□□ -0.16
Col9a2Q07643 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.08□□□□□ -0.16
Col9a2Q07643 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Col9a2Q07643 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col9a2Q07643 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col9a2Q07643 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Col9a2Q07643 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col9a2Q07643 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.07□□□□□ -0.16
Col9a2Q07643 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.07□□□□□ -0.16
Col9a2Q07643 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Gm15808-201ENSMUST00000119046 604 ntBASIC14.07□□□□□ -0.16
Col9a2Q07643 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.07□□□□□ -0.16
Col9a2Q07643 Gm44364-201ENSMUST00000198368 141 ntBASIC14.07□□□□□ -0.16
Col9a2Q07643 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.07□□□□□ -0.16
Col9a2Q07643 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Gm22058-201ENSMUST00000083393 310 ntBASIC14.07□□□□□ -0.16
Col9a2Q07643 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.07□□□□□ -0.16
Col9a2Q07643 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col9a2Q07643 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.07□□□□□ -0.16
Col9a2Q07643 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Col9a2Q07643 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.06□□□□□ -0.16
Col9a2Q07643 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.06□□□□□ -0.16
Col9a2Q07643 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.06□□□□□ -0.16
Col9a2Q07643 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col9a2Q07643 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col9a2Q07643 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms