Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.28■□□□□ 0.52
COPB2P35606 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.28■□□□□ 0.52
COPB2P35606 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.28■□□□□ 0.52
COPB2P35606 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.28■□□□□ 0.52
COPB2P35606 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.28■□□□□ 0.52
COPB2P35606 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 CDC14C-201ENST00000428251 1719 ntBASIC18.28■□□□□ 0.52
COPB2P35606 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.28■□□□□ 0.52
COPB2P35606 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
COPB2P35606 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
COPB2P35606 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COPB2P35606 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.27■□□□□ 0.52
COPB2P35606 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.27■□□□□ 0.52
COPB2P35606 KRT43P-201ENST00000434019 910 ntBASIC18.27■□□□□ 0.52
COPB2P35606 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.27■□□□□ 0.52
COPB2P35606 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.27■□□□□ 0.52
COPB2P35606 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.27■□□□□ 0.52
COPB2P35606 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.27■□□□□ 0.52
COPB2P35606 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.27■□□□□ 0.52
COPB2P35606 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.27■□□□□ 0.52
COPB2P35606 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.27■□□□□ 0.52
COPB2P35606 AP005482.1-201ENST00000563722 1273 ntBASIC18.27■□□□□ 0.52
COPB2P35606 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.27■□□□□ 0.52
COPB2P35606 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.27■□□□□ 0.52
COPB2P35606 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.27■□□□□ 0.52
COPB2P35606 AL512343.1-201ENST00000605837 169 ntBASIC18.27■□□□□ 0.52
COPB2P35606 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.27■□□□□ 0.52
COPB2P35606 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.27■□□□□ 0.52
COPB2P35606 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COPB2P35606 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPB2P35606 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.27■□□□□ 0.51
COPB2P35606 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPB2P35606 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COPB2P35606 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.27■□□□□ 0.51
COPB2P35606 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPB2P35606 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COPB2P35606 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
COPB2P35606 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
COPB2P35606 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.26■□□□□ 0.51
COPB2P35606 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COPB2P35606 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.26■□□□□ 0.51
COPB2P35606 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.26■□□□□ 0.51
COPB2P35606 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.26■□□□□ 0.51
COPB2P35606 AC008735.3-201ENST00000596646 500 ntBASIC18.26■□□□□ 0.51
COPB2P35606 AC133539.2-201ENST00000604757 467 ntBASIC18.26■□□□□ 0.51
COPB2P35606 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.26■□□□□ 0.51
COPB2P35606 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.26■□□□□ 0.51
COPB2P35606 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
COPB2P35606 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.26■□□□□ 0.51
COPB2P35606 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPB2P35606 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COPB2P35606 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.25■□□□□ 0.51
COPB2P35606 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPB2P35606 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.25■□□□□ 0.51
COPB2P35606 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.25■□□□□ 0.51
COPB2P35606 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COPB2P35606 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms