Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.93□□□□□ -0.5
P01852 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.93□□□□□ -0.5
P01852 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.93□□□□□ -0.5
P01852 Gm37922-201ENSMUST00000195596 455 ntBASIC11.93□□□□□ -0.5
P01852 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.93□□□□□ -0.5
P01852 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.93□□□□□ -0.5
P01852 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
P01852 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P01852 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P01852 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.92□□□□□ -0.5
P01852 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
P01852 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
P01852 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Gm14127-201ENSMUST00000117906 678 ntBASIC11.92□□□□□ -0.5
P01852 Gm12203-201ENSMUST00000118235 598 ntBASIC11.92□□□□□ -0.5
P01852 Gm12209-201ENSMUST00000120089 596 ntBASIC11.92□□□□□ -0.5
P01852 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.92□□□□□ -0.5
P01852 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.92□□□□□ -0.5
P01852 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.92□□□□□ -0.5
P01852 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P01852 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.92□□□□□ -0.5
P01852 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.92□□□□□ -0.5
P01852 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
P01852 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.92□□□□□ -0.5
P01852 Gm29127-201ENSMUST00000188304 517 ntBASIC11.92□□□□□ -0.5
P01852 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.92□□□□□ -0.5
P01852 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.92□□□□□ -0.5
P01852 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.92□□□□□ -0.5
P01852 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.92□□□□□ -0.5
P01852 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P01852 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
P01852 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.92□□□□□ -0.5
P01852 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
P01852 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P01852 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.91□□□□□ -0.5
P01852 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
P01852 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.91□□□□□ -0.5
P01852 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P01852 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms