Protein–RNA interactions for Protein: O15467

CCL16, C-C motif chemokine 16, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16O15467 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCL16O15467 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL16O15467 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCL16O15467 PDIA3P1-201ENST00000471856 1510 ntBASIC16.64■□□□□ 0.25
CCL16O15467 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CCL16O15467 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCL16O15467 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCL16O15467 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCL16O15467 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCL16O15467 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCL16O15467 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL16O15467 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 AC080080.1-201ENST00000625121 2420 ntBASIC16.63■□□□□ 0.25
CCL16O15467 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL16O15467 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 ACTG1P3-201ENST00000431775 1114 ntBASIC16.63■□□□□ 0.25
CCL16O15467 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL16O15467 CTBP2P5-201ENST00000454986 1264 ntBASIC16.63■□□□□ 0.25
CCL16O15467 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL16O15467 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCL16O15467 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.63■□□□□ 0.25
CCL16O15467 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.63■□□□□ 0.25
CCL16O15467 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.63■□□□□ 0.25
CCL16O15467 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL16O15467 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL16O15467 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL16O15467 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCL16O15467 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL16O15467 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL16O15467 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CCL16O15467 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL16O15467 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.63■□□□□ 0.25
CCL16O15467 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL16O15467 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL16O15467 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL16O15467 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL16O15467 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL16O15467 HAUS4P1-201ENST00000406739 1145 ntBASIC16.62■□□□□ 0.25
CCL16O15467 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL16O15467 AC134915.1-201ENST00000426461 574 ntBASIC16.62■□□□□ 0.25
CCL16O15467 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 BCRP2-202ENST00000447763 634 ntBASIC16.62■□□□□ 0.25
CCL16O15467 PHKG1P2-201ENST00000457537 863 ntBASIC16.62■□□□□ 0.25
CCL16O15467 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CCL16O15467 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 BCRP6-201ENST00000510112 632 ntBASIC16.62■□□□□ 0.25
CCL16O15467 BCRP7-201ENST00000511549 544 ntBASIC16.62■□□□□ 0.25
CCL16O15467 SLED1-202ENST00000512051 380 ntBASIC16.62■□□□□ 0.25
CCL16O15467 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL16O15467 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCL16O15467 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL16O15467 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL16O15467 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL16O15467 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL16O15467 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCL16O15467 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL16O15467 FLJ38576-201ENST00000623820 2459 ntBASIC16.61■□□□□ 0.25
CCL16O15467 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL16O15467 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms