Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 ALOX12P2-203ENST00000570921 1945 ntBASIC20.58■□□□□ 0.89
PCDH11XQ9BZA7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PCDH11XQ9BZA7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 ZNF767P-206ENST00000513792 565 ntBASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 AC025279.2-201ENST00000569730 653 ntBASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 AC068587.10-201ENST00000641210 219 ntBASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH11XQ9BZA7 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 AL133267.1-201ENST00000398220 340 ntBASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 GPAA1P2-201ENST00000417923 928 ntBASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 AL139099.5-201ENST00000635274 300 ntBASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 FZD10-202ENST00000539839 3282 ntBASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDH11XQ9BZA7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 AP001582.1-201ENST00000525856 295 ntBASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 C2orf69P2-201ENST00000562032 1123 ntBASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 MIR3615-201ENST00000581999 87 ntBASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDH11XQ9BZA7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms