Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sdc3Q64519 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.59□□□□□ -0.39
Sdc3Q64519 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Sdc3Q64519 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sdc3Q64519 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sdc3Q64519 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sdc3Q64519 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sdc3Q64519 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.58□□□□□ -0.4
Sdc3Q64519 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Gm10156-201ENSMUST00000122364 462 ntBASIC12.58□□□□□ -0.4
Sdc3Q64519 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.58□□□□□ -0.4
Sdc3Q64519 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.58□□□□□ -0.4
Sdc3Q64519 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sdc3Q64519 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sdc3Q64519 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Gm12742-201ENSMUST00000117326 410 ntBASIC12.57□□□□□ -0.4
Sdc3Q64519 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Gm6447-201ENSMUST00000118905 835 ntBASIC12.57□□□□□ -0.4
Sdc3Q64519 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.57□□□□□ -0.4
Sdc3Q64519 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.57□□□□□ -0.4
Sdc3Q64519 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.57□□□□□ -0.4
Sdc3Q64519 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.57□□□□□ -0.4
Sdc3Q64519 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sdc3Q64519 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.57□□□□□ -0.4
Sdc3Q64519 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.57□□□□□ -0.4
Sdc3Q64519 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sdc3Q64519 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Sdc3Q64519 Gm8213-201ENSMUST00000118191 441 ntBASIC12.56□□□□□ -0.4
Sdc3Q64519 Gm16177-201ENSMUST00000120728 718 ntBASIC12.56□□□□□ -0.4
Sdc3Q64519 Gm8062-201ENSMUST00000139696 444 ntBASIC12.56□□□□□ -0.4
Sdc3Q64519 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms