Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H2P55055 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H2P55055 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H2P55055 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NR1H2P55055 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.35■□□□□ 0.05
NR1H2P55055 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NR1H2P55055 RPS2P1-201ENST00000434010 821 ntBASIC15.35■□□□□ 0.05
NR1H2P55055 HNRNPDP1-201ENST00000439535 754 ntBASIC15.35■□□□□ 0.05
NR1H2P55055 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H2P55055 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.35■□□□□ 0.05
NR1H2P55055 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.35■□□□□ 0.05
NR1H2P55055 AL049840.3-201ENST00000602669 611 ntBASIC15.35■□□□□ 0.05
NR1H2P55055 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 AC116407.3-201ENST00000623905 1129 ntBASIC15.35■□□□□ 0.05
NR1H2P55055 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NR1H2P55055 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NR1H2P55055 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H2P55055 AL137784.3-201ENST00000623858 2288 ntBASIC15.34■□□□□ 0.05
NR1H2P55055 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
NR1H2P55055 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.34■□□□□ 0.05
NR1H2P55055 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.34■□□□□ 0.05
NR1H2P55055 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 MTDHP4-201ENST00000600287 670 ntBASIC15.34■□□□□ 0.05
NR1H2P55055 TERC-201ENST00000602385 541 ntBASIC15.34■□□□□ 0.05
NR1H2P55055 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NR1H2P55055 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 PMS2P7-201ENST00000506558 1336 ntBASIC15.34■□□□□ 0.05
NR1H2P55055 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
NR1H2P55055 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.34■□□□□ 0.05
NR1H2P55055 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NR1H2P55055 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.33■□□□□ 0.05
NR1H2P55055 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.33■□□□□ 0.05
NR1H2P55055 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NR1H2P55055 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NR1H2P55055 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.33■□□□□ 0.05
NR1H2P55055 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NR1H2P55055 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.33■□□□□ 0.05
NR1H2P55055 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
NR1H2P55055 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.33■□□□□ 0.04
NR1H2P55055 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NR1H2P55055 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 LAGE3P1-201ENST00000425356 484 ntBASIC15.33■□□□□ 0.04
NR1H2P55055 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.33■□□□□ 0.04
NR1H2P55055 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.33■□□□□ 0.04
NR1H2P55055 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms