Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC21.82■■□□□ 1.08
CHD2O14647 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CHD2O14647 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC21.82■■□□□ 1.08
CHD2O14647 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC21.82■■□□□ 1.08
CHD2O14647 ZACNP1-201ENST00000612259 710 ntBASIC21.82■■□□□ 1.08
CHD2O14647 MIR7845-201ENST00000618396 99 ntBASIC21.82■■□□□ 1.08
CHD2O14647 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CHD2O14647 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHD2O14647 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHD2O14647 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC21.81■■□□□ 1.08
CHD2O14647 AL355334.1-201ENST00000417713 215 ntBASIC21.81■■□□□ 1.08
CHD2O14647 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.81■■□□□ 1.08
CHD2O14647 EIF3FP3-201ENST00000434851 1086 ntBASIC21.81■■□□□ 1.08
CHD2O14647 PRKXP1-201ENST00000561423 1122 ntBASIC21.81■■□□□ 1.08
CHD2O14647 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC21.81■■□□□ 1.08
CHD2O14647 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CHD2O14647 AC244157.2-201ENST00000616239 1006 ntBASIC21.81■■□□□ 1.08
CHD2O14647 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC21.81■■□□□ 1.08
CHD2O14647 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
CHD2O14647 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CHD2O14647 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.81■■□□□ 1.08
CHD2O14647 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.81■■□□□ 1.08
CHD2O14647 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC21.8■■□□□ 1.08
CHD2O14647 SUPT4H1P2-201ENST00000501248 353 ntBASIC21.8■■□□□ 1.08
CHD2O14647 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC21.8■■□□□ 1.08
CHD2O14647 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC21.8■■□□□ 1.08
CHD2O14647 RN7SL555P-201ENST00000584742 339 ntBASIC21.8■■□□□ 1.08
CHD2O14647 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC21.8■■□□□ 1.08
CHD2O14647 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC21.8■■□□□ 1.08
CHD2O14647 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.8■■□□□ 1.08
CHD2O14647 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHD2O14647 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.8■■□□□ 1.08
CHD2O14647 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CHD2O14647 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 AC069218.1-201ENST00000435269 762 ntBASIC21.8■■□□□ 1.08
CHD2O14647 HIST2H2BB-201ENST00000449108 381 ntBASIC21.8■■□□□ 1.08
CHD2O14647 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CHD2O14647 ENPP7P14-201ENST00000621765 1040 ntBASIC21.8■■□□□ 1.08
CHD2O14647 PRSS30P-206ENST00000641773 873 ntBASIC21.8■■□□□ 1.08
CHD2O14647 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CHD2O14647 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
CHD2O14647 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CHD2O14647 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CHD2O14647 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC21.79■■□□□ 1.08
CHD2O14647 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC21.79■■□□□ 1.08
CHD2O14647 IQSEC3P1-201ENST00000538799 536 ntBASIC21.79■■□□□ 1.08
CHD2O14647 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC21.79■■□□□ 1.08
CHD2O14647 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC21.79■■□□□ 1.08
CHD2O14647 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 AC139713.2-201ENST00000641328 2723 ntBASIC21.79■■□□□ 1.08
CHD2O14647 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CHD2O14647 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD2O14647 CRCP-204ENST00000398684 492 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD2O14647 AL133466.1-201ENST00000447582 150 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms