Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NXF3Q9H4D5 CU639417.3-201ENST00000624240 1404 ntBASIC17.3■□□□□ 0.36
NXF3Q9H4D5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 AC098850.1-201ENST00000419919 790 ntBASIC17.29■□□□□ 0.36
NXF3Q9H4D5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 MEP1AP4-201ENST00000423244 1087 ntBASIC17.29■□□□□ 0.36
NXF3Q9H4D5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 MEIS3P1-201ENST00000495167 958 ntBASIC17.29■□□□□ 0.36
NXF3Q9H4D5 CR383656.12-201ENST00000549567 513 ntBASIC17.29■□□□□ 0.36
NXF3Q9H4D5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 AC099568.2-201ENST00000609194 695 ntBASIC17.29■□□□□ 0.36
NXF3Q9H4D5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NXF3Q9H4D5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 MYCLP2-201ENST00000449268 967 ntBASIC17.28■□□□□ 0.36
NXF3Q9H4D5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 AC123567.1-201ENST00000548294 1261 ntBASIC17.28■□□□□ 0.36
NXF3Q9H4D5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 AC018892.3-201ENST00000623986 2499 ntBASIC17.28■□□□□ 0.36
NXF3Q9H4D5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 AL596087.1-201ENST00000400979 1969 ntBASIC17.28■□□□□ 0.36
NXF3Q9H4D5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.28■□□□□ 0.36
NXF3Q9H4D5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.27■□□□□ 0.36
NXF3Q9H4D5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms