Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 MIR1908-201ENST00000410394 80 ntBASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 RPL7P3-201ENST00000441388 714 ntBASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 CSF2RBP1-201ENST00000447905 391 ntBASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 FO681548.1-201ENST00000455617 1132 ntBASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 VDAC1P7-201ENST00000462417 847 ntBASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 REXO1L1P-202ENST00000608646 1974 ntBASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAPGEF4Q8WZA2 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 HAUS4P1-201ENST00000406739 1145 ntBASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 AC009486.1-201ENST00000569860 813 ntBASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 AL450472.2-201ENST00000603663 1156 ntBASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RAPGEF4Q8WZA2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 TUBB1P2-201ENST00000422712 1306 ntBASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 TUBB1P1-201ENST00000503144 1300 ntBASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 AC136604.1-201ENST00000418535 575 ntBASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 AL355994.2-201ENST00000447882 704 ntBASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 RNA5SP412-201ENST00000516234 123 ntBASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 HNRNPUP1-201ENST00000554987 333 ntBASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RAPGEF4Q8WZA2 CLUHP6-201ENST00000580789 941 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms