Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 RN7SL399P-201ENST00000471648 279 ntBASIC24.81■■□□□ 1.56
VPS8Q8N3P4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 WFDC1-204ENST00000613603 549 ntBASIC24.81■■□□□ 1.56
VPS8Q8N3P4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
VPS8Q8N3P4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 CYP2AB1P-202ENST00000454440 1456 ntBASIC24.8■■□□□ 1.56
VPS8Q8N3P4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 AL442647.2-201ENST00000429864 857 ntBASIC24.8■■□□□ 1.56
VPS8Q8N3P4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 MYCLP2-201ENST00000449268 967 ntBASIC24.8■■□□□ 1.56
VPS8Q8N3P4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 AC079328.2-201ENST00000561241 3354 ntBASIC24.8■■□□□ 1.56
VPS8Q8N3P4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS8Q8N3P4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 FAM86LP-201ENST00000478302 853 ntBASIC24.79■■□□□ 1.56
VPS8Q8N3P4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 TMEM261P1-201ENST00000604899 340 ntBASIC24.79■■□□□ 1.56
VPS8Q8N3P4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS8Q8N3P4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 AC027307.3-201ENST00000594262 1100 ntBASIC24.78■■□□□ 1.56
VPS8Q8N3P4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 AL049840.4-201ENST00000602422 811 ntBASIC24.78■■□□□ 1.56
VPS8Q8N3P4 AL035252.4-201ENST00000624174 288 ntBASIC24.78■■□□□ 1.56
VPS8Q8N3P4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 AL358472.5-202ENST00000641448 1267 ntBASIC24.78■■□□□ 1.56
VPS8Q8N3P4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 CU639417.3-201ENST00000624240 1404 ntBASIC24.78■■□□□ 1.56
VPS8Q8N3P4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS8Q8N3P4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms