Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.53■□□□□ 0.88
CHL1O00533 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHL1O00533 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHL1O00533 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CHL1O00533 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC20.52■□□□□ 0.88
CHL1O00533 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHL1O00533 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
CHL1O00533 AC055876.2-201ENST00000531834 546 ntBASIC20.52■□□□□ 0.88
CHL1O00533 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.52■□□□□ 0.88
CHL1O00533 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.52■□□□□ 0.88
CHL1O00533 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.52■□□□□ 0.88
CHL1O00533 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
CHL1O00533 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.52■□□□□ 0.88
CHL1O00533 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CHL1O00533 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CHL1O00533 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHL1O00533 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.52■□□□□ 0.88
CHL1O00533 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.52■□□□□ 0.88
CHL1O00533 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHL1O00533 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHL1O00533 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
CHL1O00533 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CHL1O00533 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.52■□□□□ 0.87
CHL1O00533 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.52■□□□□ 0.87
CHL1O00533 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.51■□□□□ 0.87
CHL1O00533 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
CHL1O00533 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.51■□□□□ 0.87
CHL1O00533 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.51■□□□□ 0.87
CHL1O00533 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
CHL1O00533 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHL1O00533 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CHL1O00533 AC098850.1-201ENST00000419919 790 ntBASIC20.51■□□□□ 0.87
CHL1O00533 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.51■□□□□ 0.87
CHL1O00533 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 SLED1-202ENST00000512051 380 ntBASIC20.51■□□□□ 0.87
CHL1O00533 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.51■□□□□ 0.87
CHL1O00533 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.51■□□□□ 0.87
CHL1O00533 AL596325.1-201ENST00000563991 1082 ntBASIC20.51■□□□□ 0.87
CHL1O00533 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC20.51■□□□□ 0.87
CHL1O00533 MIR8072-201ENST00000614241 80 ntBASIC20.51■□□□□ 0.87
CHL1O00533 AL158212.4-201ENST00000624062 1286 ntBASIC20.51■□□□□ 0.87
CHL1O00533 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.51■□□□□ 0.87
CHL1O00533 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.51■□□□□ 0.87
CHL1O00533 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.51■□□□□ 0.87
CHL1O00533 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHL1O00533 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.51■□□□□ 0.87
CHL1O00533 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CHL1O00533 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.5■□□□□ 0.87
CHL1O00533 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 AC087499.6-201ENST00000411576 835 ntBASIC20.5■□□□□ 0.87
CHL1O00533 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.5■□□□□ 0.87
CHL1O00533 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.5■□□□□ 0.87
CHL1O00533 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHL1O00533 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.5■□□□□ 0.87
CHL1O00533 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.5■□□□□ 0.87
CHL1O00533 RRP7BP-205ENST00000566851 833 ntBASIC20.5■□□□□ 0.87
CHL1O00533 AC140912.1-201ENST00000577171 1054 ntBASIC20.5■□□□□ 0.87
CHL1O00533 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.5■□□□□ 0.87
CHL1O00533 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
CHL1O00533 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHL1O00533 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.5■□□□□ 0.87
CHL1O00533 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHL1O00533 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHL1O00533 AC090340.1-201ENST00000620778 4980 ntBASIC20.49■□□□□ 0.87
CHL1O00533 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 DGCR5-201ENST00000399539 862 ntBASIC20.49■□□□□ 0.87
CHL1O00533 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.49■□□□□ 0.87
CHL1O00533 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.49■□□□□ 0.87
CHL1O00533 DEK-201ENST00000244776 1441 ntTSL 2 BASIC20.49■□□□□ 0.87
CHL1O00533 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CHL1O00533 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms