Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.89■□□□□ 0.46
VTA1Q9NP79 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.89■□□□□ 0.46
VTA1Q9NP79 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
VTA1Q9NP79 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 SLC25A47P1-201ENST00000531577 414 ntBASIC17.89■□□□□ 0.45
VTA1Q9NP79 ENPP7P5-201ENST00000541031 1031 ntBASIC17.89■□□□□ 0.45
VTA1Q9NP79 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 HNRNPUP1-201ENST00000554987 333 ntBASIC17.89■□□□□ 0.45
VTA1Q9NP79 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 AC134407.2-201ENST00000625089 1978 ntBASIC17.89■□□□□ 0.45
VTA1Q9NP79 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VTA1Q9NP79 AC005052.1-201ENST00000625181 2492 ntBASIC17.89■□□□□ 0.45
VTA1Q9NP79 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
VTA1Q9NP79 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AC134915.1-201ENST00000426461 574 ntBASIC17.88■□□□□ 0.45
VTA1Q9NP79 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 AC124283.3-201ENST00000570869 594 ntBASIC17.88■□□□□ 0.45
VTA1Q9NP79 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 ALOX12P2-203ENST00000570921 1945 ntBASIC17.88■□□□□ 0.45
VTA1Q9NP79 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
VTA1Q9NP79 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 INTS4P2-202ENST00000614726 2019 ntBASIC17.88■□□□□ 0.45
VTA1Q9NP79 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VTA1Q9NP79 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 ANKRD19P-201ENST00000338192 862 ntBASIC17.87■□□□□ 0.45
VTA1Q9NP79 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
VTA1Q9NP79 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.87■□□□□ 0.45
VTA1Q9NP79 TDH-203ENST00000531764 1110 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms