Protein–RNA interactions for Protein: P56942

Pmch, Pro-MCH, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PmchP56942 Gm8927-201ENSMUST00000181978 981 ntBASIC10.7□□□□□ -0.7
PmchP56942 Gm21470-201ENSMUST00000187680 696 ntBASIC10.7□□□□□ -0.7
PmchP56942 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.7□□□□□ -0.7
PmchP56942 Gm45841-201ENSMUST00000207700 164 ntBASIC10.7□□□□□ -0.7
PmchP56942 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.7□□□□□ -0.7
PmchP56942 Gm3222-201ENSMUST00000071282 990 ntBASIC10.7□□□□□ -0.7
PmchP56942 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
PmchP56942 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
PmchP56942 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
PmchP56942 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Matn2-203ENSMUST00000226766 3252 ntBASIC10.7□□□□□ -0.7
PmchP56942 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.7□□□□□ -0.7
PmchP56942 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PmchP56942 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
PmchP56942 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Gm15770-201ENSMUST00000117498 584 ntBASIC10.69□□□□□ -0.7
PmchP56942 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Mir1897-201ENSMUST00000122581 272 ntBASIC10.69□□□□□ -0.7
PmchP56942 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC10.69□□□□□ -0.7
PmchP56942 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.69□□□□□ -0.7
PmchP56942 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Gm24158-201ENSMUST00000175263 71 ntBASIC10.69□□□□□ -0.7
PmchP56942 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Gm44335-201ENSMUST00000196879 141 ntBASIC10.69□□□□□ -0.7
PmchP56942 Gm44297-201ENSMUST00000198304 141 ntBASIC10.69□□□□□ -0.7
PmchP56942 Gm44346-201ENSMUST00000198851 141 ntBASIC10.69□□□□□ -0.7
PmchP56942 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
PmchP56942 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
PmchP56942 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
PmchP56942 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
PmchP56942 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.69□□□□□ -0.7
PmchP56942 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
PmchP56942 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PmchP56942 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PmchP56942 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.68□□□□□ -0.7
PmchP56942 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PmchP56942 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PmchP56942 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
PmchP56942 Gm8410-201ENSMUST00000117225 605 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms