Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNA1P02708 MIR5189-201ENST00000577370 114 ntBASIC17.4■□□□□ 0.38
CHRNA1P02708 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.4■□□□□ 0.38
CHRNA1P02708 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.4■□□□□ 0.38
CHRNA1P02708 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRNA1P02708 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNA1P02708 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CHRNA1P02708 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.39■□□□□ 0.38
CHRNA1P02708 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHRNA1P02708 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 AP001282.1-201ENST00000531301 1499 ntBASIC17.39■□□□□ 0.37
CHRNA1P02708 REXO1L1P-202ENST00000608646 1974 ntBASIC17.39■□□□□ 0.37
CHRNA1P02708 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CHRNA1P02708 BOLA2P3-201ENST00000404566 256 ntBASIC17.39■□□□□ 0.37
CHRNA1P02708 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRNA1P02708 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRNA1P02708 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRNA1P02708 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRNA1P02708 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 AC104989.1-201ENST00000519711 778 ntBASIC17.39■□□□□ 0.37
CHRNA1P02708 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.39■□□□□ 0.37
CHRNA1P02708 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.39■□□□□ 0.37
CHRNA1P02708 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.39■□□□□ 0.37
CHRNA1P02708 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.39■□□□□ 0.37
CHRNA1P02708 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRNA1P02708 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRNA1P02708 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHRNA1P02708 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.39■□□□□ 0.37
CHRNA1P02708 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.39■□□□□ 0.37
CHRNA1P02708 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
CHRNA1P02708 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHRNA1P02708 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.39■□□□□ 0.37
CHRNA1P02708 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHRNA1P02708 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 AC011676.5-201ENST00000624864 2660 ntBASIC17.38■□□□□ 0.37
CHRNA1P02708 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA1P02708 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 AGGF1P2-201ENST00000426656 2106 ntBASIC17.38■□□□□ 0.37
CHRNA1P02708 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA1P02708 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA1P02708 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 HAUS4P1-201ENST00000406739 1145 ntBASIC17.38■□□□□ 0.37
CHRNA1P02708 AC136604.1-201ENST00000418535 575 ntBASIC17.38■□□□□ 0.37
CHRNA1P02708 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA1P02708 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA1P02708 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.38■□□□□ 0.37
CHRNA1P02708 BNIP3P42-201ENST00000454982 569 ntBASIC17.38■□□□□ 0.37
CHRNA1P02708 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CHRNA1P02708 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.38■□□□□ 0.37
CHRNA1P02708 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.38■□□□□ 0.37
CHRNA1P02708 BNIP3P29-201ENST00000598302 571 ntBASIC17.38■□□□□ 0.37
CHRNA1P02708 AC011447.5-201ENST00000616168 564 ntBASIC17.38■□□□□ 0.37
CHRNA1P02708 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.38■□□□□ 0.37
CHRNA1P02708 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA1P02708 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA1P02708 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
CHRNA1P02708 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.38■□□□□ 0.37
CHRNA1P02708 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.38■□□□□ 0.37
CHRNA1P02708 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHRNA1P02708 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CHRNA1P02708 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CHRNA1P02708 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHRNA1P02708 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHRNA1P02708 AC099398.1-201ENST00000567919 2776 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms