Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
APOC1P02654 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.36□□□□□ -0.11
APOC1P02654 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.36□□□□□ -0.11
APOC1P02654 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.36□□□□□ -0.11
APOC1P02654 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.36□□□□□ -0.11
APOC1P02654 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.36□□□□□ -0.11
APOC1P02654 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
APOC1P02654 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.36□□□□□ -0.11
APOC1P02654 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
APOC1P02654 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.36□□□□□ -0.11
APOC1P02654 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APOC1P02654 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.36□□□□□ -0.11
APOC1P02654 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC1P02654 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 CICP14-201ENST00000629111 2732 ntBASIC14.35□□□□□ -0.11
APOC1P02654 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.35□□□□□ -0.11
APOC1P02654 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
APOC1P02654 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
APOC1P02654 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOC1P02654 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 RHOQP3-201ENST00000437982 621 ntBASIC14.35□□□□□ -0.11
APOC1P02654 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 IGHV3-22-201ENST00000520721 359 ntBASIC14.35□□□□□ -0.11
APOC1P02654 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.35□□□□□ -0.11
APOC1P02654 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
APOC1P02654 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.35□□□□□ -0.11
APOC1P02654 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
APOC1P02654 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
APOC1P02654 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 DBET-201ENST00000630918 3363 ntBASIC14.35□□□□□ -0.11
APOC1P02654 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 AC104640.1-201ENST00000562617 2109 ntBASIC14.35□□□□□ -0.11
APOC1P02654 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOC1P02654 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
APOC1P02654 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
APOC1P02654 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
APOC1P02654 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.34□□□□□ -0.11
APOC1P02654 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms