Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RGPD3A6NKT7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RGPD3A6NKT7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
RGPD3A6NKT7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.87■□□□□ 0.77
RGPD3A6NKT7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RGPD3A6NKT7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RGPD3A6NKT7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 TPM3P8-201ENST00000330554 643 ntBASIC19.86■□□□□ 0.77
RGPD3A6NKT7 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 AC025181.2-201ENST00000606994 802 ntBASIC19.86■□□□□ 0.77
RGPD3A6NKT7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 AC051619.9-201ENST00000623237 597 ntBASIC19.86■□□□□ 0.77
RGPD3A6NKT7 AC006453.1-201ENST00000636037 1257 ntBASIC19.86■□□□□ 0.77
RGPD3A6NKT7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RGPD3A6NKT7 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AL160314.3-201ENST00000556041 767 ntBASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 MIR4783-201ENST00000580343 82 ntBASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC134407.2-201ENST00000625089 1978 ntBASIC19.85■□□□□ 0.77
RGPD3A6NKT7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 CHMP1AP1-201ENST00000445563 662 ntBASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 AC020922.3-201ENST00000595064 547 ntBASIC19.85■□□□□ 0.77
RGPD3A6NKT7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.85■□□□□ 0.77
RGPD3A6NKT7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 AL139008.1-201ENST00000437894 228 ntBASIC19.84■□□□□ 0.77
RGPD3A6NKT7 RPL18P13-201ENST00000478088 569 ntBASIC19.84■□□□□ 0.77
RGPD3A6NKT7 AC242376.1-201ENST00000559033 726 ntBASIC19.84■□□□□ 0.77
RGPD3A6NKT7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 KRT8P29-201ENST00000420409 1371 ntBASIC19.84■□□□□ 0.77
RGPD3A6NKT7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.84■□□□□ 0.77
RGPD3A6NKT7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.83■□□□□ 0.77
RGPD3A6NKT7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RGPD3A6NKT7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RGPD3A6NKT7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RGPD3A6NKT7 ISCA2P1-201ENST00000425548 448 ntBASIC19.83■□□□□ 0.77
RGPD3A6NKT7 AC097065.1-201ENST00000425737 517 ntBASIC19.83■□□□□ 0.77
RGPD3A6NKT7 AC114812.1-204ENST00000449669 728 ntBASIC19.83■□□□□ 0.77
RGPD3A6NKT7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms