Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC007969.1-201ENST00000433675 447 ntBASIC21.53■■□□□ 1.04
SBNO1A3KN83 AL591846.1-201ENST00000451736 433 ntBASIC21.53■■□□□ 1.04
SBNO1A3KN83 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 IFT20-206ENST00000578122 834 ntTSL 2 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 IFT20-208ENST00000578985 831 ntTSL 3 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC21.53■■□□□ 1.04
SBNO1A3KN83 AC005695.3-201ENST00000614522 232 ntBASIC21.53■■□□□ 1.04
SBNO1A3KN83 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SBNO1A3KN83 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SBNO1A3KN83 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 RPS3-201ENST00000278572 907 ntTSL 3 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SBNO1A3KN83 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 AC104306.2-201ENST00000451877 341 ntBASIC21.52■■□□□ 1.04
SBNO1A3KN83 KRT18P43-201ENST00000469825 1281 ntBASIC21.52■■□□□ 1.04
SBNO1A3KN83 ARTN-209ENST00000479128 471 ntTSL 3 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SBNO1A3KN83 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SBNO1A3KN83 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 KC6-205ENST00000599934 556 ntTSL 4 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SBNO1A3KN83 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SBNO1A3KN83 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SBNO1A3KN83 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SBNO1A3KN83 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SBNO1A3KN83 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
SBNO1A3KN83 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 GUK1-206ENST00000366723 845 ntTSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 AC091804.1-201ENST00000486888 567 ntBASIC21.51■■□□□ 1.03
SBNO1A3KN83 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 AC005332.8-201ENST00000622750 2735 ntBASIC21.51■■□□□ 1.03
SBNO1A3KN83 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 AL121723.1-201ENST00000445194 1519 ntBASIC21.51■■□□□ 1.03
SBNO1A3KN83 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SBNO1A3KN83 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SBNO1A3KN83 DRD5P1-201ENST00000456605 1438 ntBASIC21.5■■□□□ 1.03
SBNO1A3KN83 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 GRN-222ENST00000639447 1314 ntTSL 2 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 GPX4-206ENST00000588919 803 ntTSL 2 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 AC093813.1-201ENST00000605066 256 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms