Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 AC123567.1-201ENST00000548294 1261 ntBASIC24.89■■□□□ 1.58
VPS8Q8N3P4 AC036164.1-201ENST00000570544 333 ntBASIC24.89■■□□□ 1.58
VPS8Q8N3P4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
VPS8Q8N3P4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
VPS8Q8N3P4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 AL596325.1-201ENST00000563991 1082 ntBASIC24.88■■□□□ 1.57
VPS8Q8N3P4 AC015910.1-201ENST00000579400 975 ntBASIC24.88■■□□□ 1.57
VPS8Q8N3P4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC24.88■■□□□ 1.57
VPS8Q8N3P4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 DGCR5-201ENST00000399539 862 ntBASIC24.87■■□□□ 1.57
VPS8Q8N3P4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 TIMM17BP1-201ENST00000545713 516 ntBASIC24.87■■□□□ 1.57
VPS8Q8N3P4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC24.87■■□□□ 1.57
VPS8Q8N3P4 AC087499.6-201ENST00000411576 835 ntBASIC24.86■■□□□ 1.57
VPS8Q8N3P4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 BRI3BPP1-201ENST00000594224 787 ntBASIC24.86■■□□□ 1.57
VPS8Q8N3P4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 RPSAP52-203ENST00000622976 1023 ntBASIC24.86■■□□□ 1.57
VPS8Q8N3P4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS8Q8N3P4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms