Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Slc6a1P31648 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.3□□□□□ -0.6
Slc6a1P31648 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc6a1P31648 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Slc6a1P31648 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.3□□□□□ -0.6
Slc6a1P31648 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.3□□□□□ -0.6
Slc6a1P31648 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm15483-201ENSMUST00000120338 456 ntBASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Slc6a1P31648 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Slc6a1P31648 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.3□□□□□ -0.6
Slc6a1P31648 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.3□□□□□ -0.6
Slc6a1P31648 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.3□□□□□ -0.6
Slc6a1P31648 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.3□□□□□ -0.6
Slc6a1P31648 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Slc6a1P31648 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Slc6a1P31648 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.29□□□□□ -0.6
Slc6a1P31648 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.29□□□□□ -0.6
Slc6a1P31648 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Slc6a1P31648 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.29□□□□□ -0.6
Slc6a1P31648 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.28□□□□□ -0.6
Slc6a1P31648 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Slc6a1P31648 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Slc6a1P31648 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Slc6a1P31648 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms