Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.65□□□□□ -0.38
CD28P10747 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CD28P10747 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
CD28P10747 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.65□□□□□ -0.39
CD28P10747 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.65□□□□□ -0.39
CD28P10747 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CD28P10747 GCK-202ENST00000345378 2421 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.64□□□□□ -0.39
CD28P10747 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.64□□□□□ -0.39
CD28P10747 NKILA-202ENST00000614771 2598 ntBASIC12.64□□□□□ -0.39
CD28P10747 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CD28P10747 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.64□□□□□ -0.39
CD28P10747 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 NME2P1-201ENST00000426182 414 ntBASIC12.64□□□□□ -0.39
CD28P10747 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.64□□□□□ -0.39
CD28P10747 AC044860.1-202ENST00000559481 777 ntBASIC12.64□□□□□ -0.39
CD28P10747 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.64□□□□□ -0.39
CD28P10747 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.64□□□□□ -0.39
CD28P10747 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CD28P10747 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 AC022211.2-201ENST00000585075 2527 ntBASIC12.64□□□□□ -0.39
CD28P10747 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CD28P10747 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CD28P10747 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.64□□□□□ -0.39
CD28P10747 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CD28P10747 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CD28P10747 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 PCGF3-213ENST00000620529 1899 ntBASIC12.63□□□□□ -0.39
CD28P10747 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.63□□□□□ -0.39
CD28P10747 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.63□□□□□ -0.39
CD28P10747 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.63□□□□□ -0.39
CD28P10747 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.63□□□□□ -0.39
CD28P10747 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.63□□□□□ -0.39
CD28P10747 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 AC011676.5-201ENST00000624864 2660 ntBASIC12.63□□□□□ -0.39
CD28P10747 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CD28P10747 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.63□□□□□ -0.39
CD28P10747 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CD28P10747 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.63□□□□□ -0.39
CD28P10747 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.63□□□□□ -0.39
CD28P10747 SERBP1P3-201ENST00000459980 809 ntBASIC12.63□□□□□ -0.39
CD28P10747 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.63□□□□□ -0.39
CD28P10747 CR383656.12-201ENST00000549567 513 ntBASIC12.63□□□□□ -0.39
CD28P10747 AC010336.2-201ENST00000564226 506 ntBASIC12.63□□□□□ -0.39
CD28P10747 TP53TG3HP-202ENST00000569755 579 ntBASIC12.63□□□□□ -0.39
CD28P10747 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CD28P10747 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CD28P10747 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.63□□□□□ -0.39
CD28P10747 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms