Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
C9orf85Q96MD7 AC006058.4-201ENST00000624016 1670 ntBASIC11.75□□□□□ -0.53
C9orf85Q96MD7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 AC144831.1-201ENST00000573312 2656 ntBASIC11.74□□□□□ -0.53
C9orf85Q96MD7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 AC116407.3-201ENST00000623905 1129 ntBASIC11.74□□□□□ -0.53
C9orf85Q96MD7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 PMS2P7-201ENST00000506558 1336 ntBASIC11.74□□□□□ -0.53
C9orf85Q96MD7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
C9orf85Q96MD7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 AC093909.1-201ENST00000504731 1122 ntBASIC11.73□□□□□ -0.53
C9orf85Q96MD7 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 RNA5SP415-201ENST00000517246 115 ntBASIC11.73□□□□□ -0.53
C9orf85Q96MD7 IGHV3-22-201ENST00000520721 359 ntBASIC11.73□□□□□ -0.53
C9orf85Q96MD7 EHF-205ENST00000527935 557 ntTSL 2 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 RN7SL510P-201ENST00000581311 263 ntBASIC11.73□□□□□ -0.53
C9orf85Q96MD7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.73□□□□□ -0.53
C9orf85Q96MD7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C9orf85Q96MD7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms