Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 DGCR5-201ENST00000399539 862 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 EIF2S2P3-201ENST00000428356 999 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC055876.2-201ENST00000531834 546 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC023310.3-201ENST00000557027 670 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC243562.2-201ENST00000561247 970 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC100756.1-201ENST00000562736 682 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC138749.3-201ENST00000567691 622 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 RN7SL440P-201ENST00000577855 343 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC008494.3-201ENST00000606615 944 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC116165.1-201ENST00000611806 668 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 AC009452.1-201ENST00000640823 606 ntBASIC17.08■□□□□ 0.32
VARS2Q5ST30 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.08■□□□□ 0.32
VARS2Q5ST30 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
VARS2Q5ST30 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 AC138969.3-201ENST00000546612 1459 ntBASIC17.07■□□□□ 0.32
VARS2Q5ST30 AC138932.2-201ENST00000548268 1459 ntBASIC17.07■□□□□ 0.32
VARS2Q5ST30 AC126755.4-201ENST00000549796 1459 ntBASIC17.07■□□□□ 0.32
VARS2Q5ST30 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 AC092337.1-201ENST00000568699 1129 ntBASIC17.07■□□□□ 0.32
VARS2Q5ST30 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VARS2Q5ST30 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
VARS2Q5ST30 AD000864.1-201ENST00000624076 2295 ntBASIC17.07■□□□□ 0.32
VARS2Q5ST30 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
VARS2Q5ST30 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.06■□□□□ 0.32
VARS2Q5ST30 EEF1DP4-201ENST00000446006 880 ntBASIC17.06■□□□□ 0.32
VARS2Q5ST30 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms