Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.4□□□□□ -0.1
MMP28Q9H239 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
MMP28Q9H239 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
MMP28Q9H239 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 AC117489.1-201ENST00000625169 3217 ntBASIC14.39□□□□□ -0.11
MMP28Q9H239 AC016027.1-202ENST00000607927 1699 ntBASIC14.39□□□□□ -0.11
MMP28Q9H239 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MMP28Q9H239 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 MYCLP1-201ENST00000372451 1075 ntBASIC14.39□□□□□ -0.11
MMP28Q9H239 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
MMP28Q9H239 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
MMP28Q9H239 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
MMP28Q9H239 AC122714.2-201ENST00000502787 707 ntBASIC14.39□□□□□ -0.11
MMP28Q9H239 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP28Q9H239 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 RN7SL510P-201ENST00000581311 263 ntBASIC14.39□□□□□ -0.11
MMP28Q9H239 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 C8orf49-201ENST00000525043 1968 ntBASIC14.39□□□□□ -0.11
MMP28Q9H239 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MMP28Q9H239 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.39□□□□□ -0.11
MMP28Q9H239 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.39□□□□□ -0.11
MMP28Q9H239 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MMP28Q9H239 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.39□□□□□ -0.11
MMP28Q9H239 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MMP28Q9H239 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP28Q9H239 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
MMP28Q9H239 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
MMP28Q9H239 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP28Q9H239 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP28Q9H239 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP28Q9H239 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 AC002310.6-201ENST00000624451 1377 ntBASIC14.38□□□□□ -0.11
MMP28Q9H239 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP28Q9H239 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP28Q9H239 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 IGHV3-47-201ENST00000425060 335 ntBASIC14.38□□□□□ -0.11
MMP28Q9H239 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 AC096582.2-201ENST00000510860 516 ntBASIC14.38□□□□□ -0.11
MMP28Q9H239 AC111152.3-201ENST00000569699 673 ntBASIC14.38□□□□□ -0.11
MMP28Q9H239 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.38□□□□□ -0.11
MMP28Q9H239 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MMP28Q9H239 LINC00552-201ENST00000625151 2579 ntBASIC14.38□□□□□ -0.11
MMP28Q9H239 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP28Q9H239 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MMP28Q9H239 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP28Q9H239 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP28Q9H239 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
MMP28Q9H239 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms