Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Gm6023-201ENSMUST00000118217 606 ntBASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Gm37042-201ENSMUST00000193816 581 ntBASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Gm3961-201ENSMUST00000204425 994 ntBASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sh3rf2Q8BZT2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Sh3rf2Q8BZT2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gm17208-201ENSMUST00000168388 535 ntBASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gm3890-201ENSMUST00000182416 207 ntBASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gm29396-201ENSMUST00000185659 716 ntBASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Gm10608-202ENSMUST00000213924 676 ntBASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sh3rf2Q8BZT2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Gm13342-201ENSMUST00000121055 207 ntBASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Gm9368-201ENSMUST00000219348 831 ntBASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf2Q8BZT2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms