Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 AC022532.1-201ENST00000624563 1728 ntBASIC14.24□□□□□ -0.13
C11orf88Q6PI97 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.24□□□□□ -0.13
C11orf88Q6PI97 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 AC093909.1-201ENST00000504731 1122 ntBASIC14.23□□□□□ -0.13
C11orf88Q6PI97 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 AL596087.1-201ENST00000400979 1969 ntBASIC14.23□□□□□ -0.13
C11orf88Q6PI97 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 PRAL-201ENST00000624952 3286 ntBASIC14.23□□□□□ -0.13
C11orf88Q6PI97 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C11orf88Q6PI97 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AL645728.1-201ENST00000366221 2101 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 RBM17P3-201ENST00000417687 1192 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AC079781.3-201ENST00000449110 356 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 SCARNA2-201ENST00000458748 420 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AF186996.4-201ENST00000467186 377 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AC096582.2-201ENST00000510860 516 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AC109462.3-201ENST00000573934 613 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 MIR5100-201ENST00000579544 119 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 AC005336.2-201ENST00000593183 939 ntBASIC14.22□□□□□ -0.13
C11orf88Q6PI97 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.22□□□□□ -0.13
C11orf88Q6PI97 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms