Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc4Q3TCX3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gm11803-201ENSMUST00000119966 444 ntBASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gm6152-201ENSMUST00000151704 340 ntBASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gm24447-201ENSMUST00000083977 338 ntBASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc4Q3TCX3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Gm8810-201ENSMUST00000172895 754 ntBASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Gm5370-201ENSMUST00000187187 574 ntBASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.53□□□□□ -0.4
Khdc4Q3TCX3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms