Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.98■□□□□ 0.95
CCDC27Q2M243 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC27Q2M243 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC27Q2M243 FO538757.1-201ENST00000623083 1397 ntBASIC20.97■□□□□ 0.95
CCDC27Q2M243 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 CETN4P-206ENST00000642099 2168 ntBASIC20.97■□□□□ 0.95
CCDC27Q2M243 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 AC107890.1-201ENST00000422478 521 ntBASIC20.97■□□□□ 0.95
CCDC27Q2M243 AL645939.2-201ENST00000427340 991 ntBASIC20.97■□□□□ 0.95
CCDC27Q2M243 AC092580.3-201ENST00000430932 139 ntBASIC20.97■□□□□ 0.95
CCDC27Q2M243 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 AC125807.1-201ENST00000483097 614 ntBASIC20.97■□□□□ 0.95
CCDC27Q2M243 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.97■□□□□ 0.95
CCDC27Q2M243 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC27Q2M243 AC007950.2-201ENST00000615045 2347 ntBASIC20.96■□□□□ 0.95
CCDC27Q2M243 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 BAD-202ENST00000394531 631 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 MTND6P24-201ENST00000440466 518 ntBASIC20.96■□□□□ 0.95
CCDC27Q2M243 PHKG1P2-201ENST00000457537 863 ntBASIC20.96■□□□□ 0.95
CCDC27Q2M243 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 AC097359.3-201ENST00000603982 1210 ntBASIC20.96■□□□□ 0.95
CCDC27Q2M243 AL589739.1-201ENST00000607720 493 ntBASIC20.96■□□□□ 0.95
CCDC27Q2M243 AL138828.2-201ENST00000615812 383 ntBASIC20.96■□□□□ 0.95
CCDC27Q2M243 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CCDC27Q2M243 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC27Q2M243 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.95■□□□□ 0.95
CCDC27Q2M243 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
CCDC27Q2M243 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CCDC27Q2M243 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC27Q2M243 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC27Q2M243 AZGP1P1-201ENST00000411909 902 ntBASIC20.95■□□□□ 0.94
CCDC27Q2M243 AC136604.1-201ENST00000418535 575 ntBASIC20.95■□□□□ 0.94
CCDC27Q2M243 FAM86GP-201ENST00000448322 971 ntBASIC20.95■□□□□ 0.94
CCDC27Q2M243 AC069120.2-201ENST00000524091 540 ntBASIC20.95■□□□□ 0.94
CCDC27Q2M243 HNRNPUP1-201ENST00000554987 333 ntBASIC20.95■□□□□ 0.94
CCDC27Q2M243 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 AL450472.2-201ENST00000603663 1156 ntBASIC20.95■□□□□ 0.94
CCDC27Q2M243 TEX28P1-201ENST00000613479 1221 ntBASIC20.95■□□□□ 0.94
CCDC27Q2M243 TEX28P2-201ENST00000617764 1221 ntBASIC20.95■□□□□ 0.94
CCDC27Q2M243 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC27Q2M243 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms