Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.81■□□□□ 0.44
CDK7P50613 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.81■□□□□ 0.44
CDK7P50613 CTBP2P5-201ENST00000454986 1264 ntBASIC17.81■□□□□ 0.44
CDK7P50613 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.81■□□□□ 0.44
CDK7P50613 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK7P50613 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK7P50613 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.81■□□□□ 0.44
CDK7P50613 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.81■□□□□ 0.44
CDK7P50613 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.81■□□□□ 0.44
CDK7P50613 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.81■□□□□ 0.44
CDK7P50613 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDK7P50613 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 AP001094.4-201ENST00000579008 2176 ntBASIC17.81■□□□□ 0.44
CDK7P50613 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDK7P50613 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.81■□□□□ 0.44
CDK7P50613 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDK7P50613 KRT8P22-201ENST00000562317 1415 ntBASIC17.81■□□□□ 0.44
CDK7P50613 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.8■□□□□ 0.44
CDK7P50613 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK7P50613 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDK7P50613 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK7P50613 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.8■□□□□ 0.44
CDK7P50613 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDK7P50613 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDK7P50613 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.8■□□□□ 0.44
CDK7P50613 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 AL442647.2-201ENST00000429864 857 ntBASIC17.8■□□□□ 0.44
CDK7P50613 KLF2P4-201ENST00000451959 1225 ntBASIC17.8■□□□□ 0.44
CDK7P50613 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDK7P50613 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK7P50613 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.8■□□□□ 0.44
CDK7P50613 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK7P50613 MIR4321-201ENST00000592276 80 ntBASIC17.8■□□□□ 0.44
CDK7P50613 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.8■□□□□ 0.44
CDK7P50613 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.8■□□□□ 0.44
CDK7P50613 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CDK7P50613 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CDK7P50613 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.8■□□□□ 0.44
CDK7P50613 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CDK7P50613 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.8■□□□□ 0.44
CDK7P50613 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDK7P50613 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDK7P50613 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDK7P50613 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK7P50613 TUBB1P2-201ENST00000422712 1306 ntBASIC17.79■□□□□ 0.44
CDK7P50613 TUBB1P1-201ENST00000503144 1300 ntBASIC17.79■□□□□ 0.44
CDK7P50613 AL391005.1-201ENST00000623953 2435 ntBASIC17.79■□□□□ 0.44
CDK7P50613 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK7P50613 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK7P50613 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.79■□□□□ 0.44
CDK7P50613 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDK7P50613 AC099336.1-201ENST00000417053 1171 ntBASIC17.79■□□□□ 0.44
CDK7P50613 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK7P50613 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.79■□□□□ 0.44
CDK7P50613 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK7P50613 RNA5SP412-201ENST00000516234 123 ntBASIC17.79■□□□□ 0.44
CDK7P50613 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.79■□□□□ 0.44
CDK7P50613 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.79■□□□□ 0.44
CDK7P50613 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms