Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.33■□□□□ 0.2
VAPBO95292 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.33■□□□□ 0.2
VAPBO95292 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VAPBO95292 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.33■□□□□ 0.2
VAPBO95292 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VAPBO95292 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VAPBO95292 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.33■□□□□ 0.2
VAPBO95292 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VAPBO95292 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VAPBO95292 AP005117.1-202ENST00000581724 1908 ntBASIC16.33■□□□□ 0.2
VAPBO95292 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VAPBO95292 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VAPBO95292 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VAPBO95292 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
VAPBO95292 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 MST1L-201ENST00000442552 2185 ntBASIC16.32■□□□□ 0.2
VAPBO95292 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 PRYP6-201ENST00000514804 343 ntBASIC16.32■□□□□ 0.2
VAPBO95292 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.32■□□□□ 0.2
VAPBO95292 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VAPBO95292 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VAPBO95292 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.32■□□□□ 0.2
VAPBO95292 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.32■□□□□ 0.2
VAPBO95292 AC099522.2-201ENST00000607001 744 ntBASIC16.32■□□□□ 0.2
VAPBO95292 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.32■□□□□ 0.2
VAPBO95292 AL589702.1-201ENST00000641229 1509 ntBASIC16.32■□□□□ 0.2
VAPBO95292 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VAPBO95292 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VAPBO95292 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.31■□□□□ 0.2
VAPBO95292 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VAPBO95292 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VAPBO95292 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.31■□□□□ 0.2
VAPBO95292 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
VAPBO95292 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.31■□□□□ 0.2
VAPBO95292 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
VAPBO95292 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VAPBO95292 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VAPBO95292 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.31■□□□□ 0.2
VAPBO95292 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 MIR940-201ENST00000401276 94 ntBASIC16.31■□□□□ 0.2
VAPBO95292 AC023274.1-201ENST00000418278 595 ntBASIC16.31■□□□□ 0.2
VAPBO95292 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VAPBO95292 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.31■□□□□ 0.2
VAPBO95292 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.31■□□□□ 0.2
VAPBO95292 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.31■□□□□ 0.2
VAPBO95292 AC002347.1-201ENST00000569543 541 ntBASIC16.31■□□□□ 0.2
VAPBO95292 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.31■□□□□ 0.2
VAPBO95292 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.31■□□□□ 0.2
VAPBO95292 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VAPBO95292 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.31■□□□□ 0.2
VAPBO95292 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.31■□□□□ 0.2
VAPBO95292 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VAPBO95292 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VAPBO95292 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.3■□□□□ 0.2
VAPBO95292 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.3■□□□□ 0.2
VAPBO95292 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VAPBO95292 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms