Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cr1Q9Z0D9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cx3cr1Q9Z0D9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cx3cr1Q9Z0D9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cx3cr1Q9Z0D9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Cx3cr1Q9Z0D9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Cx3cr1Q9Z0D9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cr1Q9Z0D9 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.01■□□□□ 0.47
Cx3cr1Q9Z0D9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cr1Q9Z0D9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cx3cr1Q9Z0D9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cr1Q9Z0D9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cx3cr1Q9Z0D9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cx3cr1Q9Z0D9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Cx3cr1Q9Z0D9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cx3cr1Q9Z0D9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cx3cr1Q9Z0D9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cx3cr1Q9Z0D9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cx3cr1Q9Z0D9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.99■□□□□ 0.47
Cx3cr1Q9Z0D9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cr1Q9Z0D9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cr1Q9Z0D9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cr1Q9Z0D9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cr1Q9Z0D9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cx3cr1Q9Z0D9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cr1Q9Z0D9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cr1Q9Z0D9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.98■□□□□ 0.47
Cx3cr1Q9Z0D9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.98■□□□□ 0.47
Cx3cr1Q9Z0D9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cr1Q9Z0D9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cr1Q9Z0D9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cx3cr1Q9Z0D9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Gm8503-201ENSMUST00000118131 455 ntBASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cx3cr1Q9Z0D9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Notumos-201ENSMUST00000151998 2659 ntBASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cx3cr1Q9Z0D9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cx3cr1Q9Z0D9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cr1Q9Z0D9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cr1Q9Z0D9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cr1Q9Z0D9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cr1Q9Z0D9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cr1Q9Z0D9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.94■□□□□ 0.46
Cx3cr1Q9Z0D9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cx3cr1Q9Z0D9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cr1Q9Z0D9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.93■□□□□ 0.46
Cx3cr1Q9Z0D9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cx3cr1Q9Z0D9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cx3cr1Q9Z0D9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cr1Q9Z0D9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cr1Q9Z0D9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cr1Q9Z0D9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cr1Q9Z0D9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cr1Q9Z0D9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cx3cr1Q9Z0D9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Cx3cr1Q9Z0D9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cx3cr1Q9Z0D9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cx3cr1Q9Z0D9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cx3cr1Q9Z0D9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cx3cr1Q9Z0D9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cx3cr1Q9Z0D9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Cx3cr1Q9Z0D9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cx3cr1Q9Z0D9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cx3cr1Q9Z0D9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cx3cr1Q9Z0D9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cx3cr1Q9Z0D9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.89■□□□□ 0.45
Cx3cr1Q9Z0D9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms