Protein–RNA interactions for Protein: Q9JJR9

Nrip3, Nuclear receptor-interacting protein 3, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip3Q9JJR9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nrip3Q9JJR9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nrip3Q9JJR9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nrip3Q9JJR9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nrip3Q9JJR9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nrip3Q9JJR9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nrip3Q9JJR9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nrip3Q9JJR9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nrip3Q9JJR9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nrip3Q9JJR9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nrip3Q9JJR9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrip3Q9JJR9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nrip3Q9JJR9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrip3Q9JJR9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrip3Q9JJR9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrip3Q9JJR9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrip3Q9JJR9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nrip3Q9JJR9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrip3Q9JJR9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
Nrip3Q9JJR9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrip3Q9JJR9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrip3Q9JJR9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrip3Q9JJR9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrip3Q9JJR9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrip3Q9JJR9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nrip3Q9JJR9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nrip3Q9JJR9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nrip3Q9JJR9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nrip3Q9JJR9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nrip3Q9JJR9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.24■□□□□ 0.67
Nrip3Q9JJR9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nrip3Q9JJR9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
Nrip3Q9JJR9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nrip3Q9JJR9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nrip3Q9JJR9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Nrip3Q9JJR9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.23■□□□□ 0.67
Nrip3Q9JJR9 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.23■□□□□ 0.67
Nrip3Q9JJR9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nrip3Q9JJR9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nrip3Q9JJR9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nrip3Q9JJR9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.21■□□□□ 0.67
Nrip3Q9JJR9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nrip3Q9JJR9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nrip3Q9JJR9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nrip3Q9JJR9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nrip3Q9JJR9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nrip3Q9JJR9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nrip3Q9JJR9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Nrip3Q9JJR9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nrip3Q9JJR9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nrip3Q9JJR9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nrip3Q9JJR9 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.16■□□□□ 0.66
Nrip3Q9JJR9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nrip3Q9JJR9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.16■□□□□ 0.66
Nrip3Q9JJR9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nrip3Q9JJR9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.16■□□□□ 0.66
Nrip3Q9JJR9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nrip3Q9JJR9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms