Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Gm43566-201ENSMUST00000196851 808 ntBASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Gm45444-201ENSMUST00000211394 898 ntBASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cthrc1Q9D1D6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cthrc1Q9D1D6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cthrc1Q9D1D6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.86■□□□□ 0.77
Cthrc1Q9D1D6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cthrc1Q9D1D6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cthrc1Q9D1D6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cthrc1Q9D1D6 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cthrc1Q9D1D6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.84■□□□□ 0.77
Cthrc1Q9D1D6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.84■□□□□ 0.77
Cthrc1Q9D1D6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cthrc1Q9D1D6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cthrc1Q9D1D6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cthrc1Q9D1D6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cthrc1Q9D1D6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cthrc1Q9D1D6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cthrc1Q9D1D6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cthrc1Q9D1D6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.82■□□□□ 0.76
Cthrc1Q9D1D6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cthrc1Q9D1D6 Notumos-201ENSMUST00000151998 2659 ntBASIC19.82■□□□□ 0.76
Cthrc1Q9D1D6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cthrc1Q9D1D6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cthrc1Q9D1D6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cthrc1Q9D1D6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cthrc1Q9D1D6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cthrc1Q9D1D6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cthrc1Q9D1D6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cthrc1Q9D1D6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cthrc1Q9D1D6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cthrc1Q9D1D6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cthrc1Q9D1D6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cthrc1Q9D1D6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cthrc1Q9D1D6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.77■□□□□ 0.76
Cthrc1Q9D1D6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cthrc1Q9D1D6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cthrc1Q9D1D6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cthrc1Q9D1D6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cthrc1Q9D1D6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cthrc1Q9D1D6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cthrc1Q9D1D6 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 107.4 ms