Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hcfc1r1Q9CYQ5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Hcfc1r1Q9CYQ5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hcfc1r1Q9CYQ5 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.43■□□□□ 0.54
Hcfc1r1Q9CYQ5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.43■□□□□ 0.54
Hcfc1r1Q9CYQ5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hcfc1r1Q9CYQ5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hcfc1r1Q9CYQ5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hcfc1r1Q9CYQ5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Hcfc1r1Q9CYQ5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Hcfc1r1Q9CYQ5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hcfc1r1Q9CYQ5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcfc1r1Q9CYQ5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hcfc1r1Q9CYQ5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1r1Q9CYQ5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1r1Q9CYQ5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.38■□□□□ 0.53
Hcfc1r1Q9CYQ5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1r1Q9CYQ5 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1r1Q9CYQ5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hcfc1r1Q9CYQ5 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.38■□□□□ 0.53
Hcfc1r1Q9CYQ5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Gm8503-201ENSMUST00000118131 455 ntBASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hcfc1r1Q9CYQ5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1r1Q9CYQ5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1r1Q9CYQ5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1r1Q9CYQ5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Hcfc1r1Q9CYQ5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1r1Q9CYQ5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1r1Q9CYQ5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hcfc1r1Q9CYQ5 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hcfc1r1Q9CYQ5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hcfc1r1Q9CYQ5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.35■□□□□ 0.53
Hcfc1r1Q9CYQ5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hcfc1r1Q9CYQ5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hcfc1r1Q9CYQ5 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.35■□□□□ 0.53
Hcfc1r1Q9CYQ5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.34■□□□□ 0.53
Hcfc1r1Q9CYQ5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Hcfc1r1Q9CYQ5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hcfc1r1Q9CYQ5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hcfc1r1Q9CYQ5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hcfc1r1Q9CYQ5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Hcfc1r1Q9CYQ5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1r1Q9CYQ5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1r1Q9CYQ5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hcfc1r1Q9CYQ5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.32■□□□□ 0.52
Hcfc1r1Q9CYQ5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1r1Q9CYQ5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1r1Q9CYQ5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hcfc1r1Q9CYQ5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcfc1r1Q9CYQ5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.31■□□□□ 0.52
Hcfc1r1Q9CYQ5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hcfc1r1Q9CYQ5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcfc1r1Q9CYQ5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcfc1r1Q9CYQ5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hcfc1r1Q9CYQ5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.31■□□□□ 0.52
Hcfc1r1Q9CYQ5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Hcfc1r1Q9CYQ5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Hcfc1r1Q9CYQ5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1r1Q9CYQ5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1r1Q9CYQ5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1r1Q9CYQ5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1r1Q9CYQ5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.3■□□□□ 0.52
Hcfc1r1Q9CYQ5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms